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Introduction

If you use Fulfillment by Amazon (FBA), you already know the power of Amazon’s logistics network. But are you leaving money on the table when it comes to tax planning? This guide reveals advanced strategies – entity elections, inventory accounting, and credits – that FBA sellers can leverage in 2025 to boost savings and simplify compliance.

Tax Code References

  • Inventory Valuation (IRC §§ 471 & 263A): Requires capitalization of all direct and allocable indirect costs into inventory until sale.
  • Section 179 Expensing (IRC § 179): Allows immediate deduction of qualifying equipment and software used in your FBA business.
  • Research & Development Credit (IRC § 41): May apply to costs developing custom packaging, product formulations, or branding assets.
  • Qualified Business Income Deduction (IRC § 199A): Pass-through entities can deduct up to 20% of qualified net income.
  • Self-Employment Tax (IRC § 1401): Net earnings from your business are subject to Social Security and Medicare taxes unless minimized via S-Corp distributions.

Relevant Forms

  • Form 1040, Schedule C: Report gross receipts, COGS, and deductible expenses.
  • Form 4562: Elect Section 179 and claim depreciation on equipment and software.
  • Form 6765: Claim R&D tax credits for qualifying development costs.
  • Form 8995/8995-A: Calculate the QBI deduction.
  • Schedule SE (Form 1040): Compute self-employment tax.
  • Form 1040-ES: Make quarterly estimated tax payments.
  • Form 1099-K: Reconcile third-party payment transactions.

Detailed Example

Scenario: ElevateDropship, an FBA seller, sources custom-branded phone grips in 2025.

  • Inventory Purchases: 5,000 units @ $4/unit = $20,000
  • Freight & Prep Fees: $3,000 (air freight + prep centers)
  • Branding Design Costs: $5,000 (qualifies for R&D credit)
  • Equipment: $2,500 labeling machine (Section 179 eligible)
  • Gross Sales: $80,000; COGS: $23,000

Tax Impact:

  1. COGS (IRC §§ 471/263A): $23,000
  2. Section 179 (IRC § 179): Immediate $2,500 deduction on Form 4562
  3. R&D Credit (IRC § 41): 20% of $5,000 = $1,000 credit on Form 6765
  4. Net Income Before QBI: $80,000 − $23,000 − $2,500 = $54,500
  5. QBI Deduction (IRC § 199A): 20% × $54,500 = $10,900
  6. Self-Employment Tax Savings: By electing S-Corp, ElevateDropship pays owner salary of $30,000 and distribution of $24,500 – reducing SE tax on distributions.

Step-by-Step Compliance Guide

  1. Choose the Right Entity & Election
    • Form an LLC and file Form 2553 by March 15 to elect S-Corp status.
  2. Optimize Inventory Costing
    • Track all purchase, freight, prep, and storage costs; capitalize per IRC §§ 471 & 263A.
  3. Maximize Section 179
    • Identify qualifying equipment/software; elect expensing on Form 4562.
  4. Leverage R&D Credits
    • Document development of custom packaging or product improvements; claim via Form 6765.
  5. Calculate QBI Deduction
    • Use Form 8995/8995-A after reducing taxable income with expenses and credit.
  6. Manage Reasonable Compensation
    • Establish salary vs. distributions to minimize SE tax under IRC § 1401.
  7. File & Pay on Time
    • Submit Schedule C, SE, and Forms 4562, 6765, 8995 with Form 1040 by April 15; pay estimates via Form 1040-ES.
  8. Maintain Detailed Records
    • Retain invoices, depreciation schedules, credit calculations, payroll records, and 1099-K statements.

Conclusion

FBA sellers have unique opportunities to optimize tax outcomes through proper inventory capitalization, Section 179 expensing, R&D credits, and entity strategy. Implement these advanced strategies in 2025 to supercharge cash flow and stay IRS-compliant.

Strong Call to Action

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Disclaimer

Anshul Goyal, CPA, EA, FCA, is a licensed Certified Public Accountant in the United States and an Enrolled Agent before the IRS. He represents clients in tax litigation and specializes in cross-border e-commerce tax planning. This blog is for informational purposes and does not constitute professional advice.

About Our CPA

With over a decade of U.S. and international tax expertise, Anshul Goyal helps FBA entrepreneurs streamline compliance, maximize deductions, and scale profitably.

Frequently Asked Questions

1. Should I elect S-Corp status for my FBA business?
Electing S-Corp (via Form 2553) can reduce self-employment tax on distributions; file by March 15.

2. What qualifies for R&D credits?
Activities improving product design, packaging, or branding that meet the IRS four-part test.

3. How do I capitalize prep center fees?
Include them in inventory costs under IRC § 263A until items are sold.

4. When is the Section 179 deadline?
Assets must be placed in service by December 31, 2025 to qualify.

5. How do I substantiate my deductions?
Keep invoices, project memos, payroll records, and credit worksheets for at least four years.

 

 

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